Human cerna database

Author: iyxw

August undefined, 2024

Web1 day ago · The next thing we need to do is initialize our Azure OpenAI model. To do so, we will use LangChain, a Python library that makes it easier to combine the power of Large … WebOct 7, 2024 · Integrated analysis of lncRNA-miRNA-mRNA ceRNA network in human aortic dissection. Hao Zhang, 1 Ce Bian, 2 Simei Tu, 1 Fanxing Yin, 1 Panpan Guo, 1 Jian Zhang, 3 Xiaotong Song, 1 Qingyang Liu, 1 Chen Chen, 4 and Yanshuo Han 1 ... we applied GEO database for downloading series matrix files and expressive data. The data flow …

A Novel Competing Endogenous RNA Network Associated With …

WebNov 26, 2024 · LncACTdb 3.0 is a comprehensive database of experimentally supported interactions among competing endogenous RNA (ceRNA) and the corresponding personalized networks contributing to precision medicine. WebNov 26, 2024 · We have developed a database for collecting, storing, and analyzing experimentally supported ceRNA interactions and comprehensive annotations: … how many rads are in an x ray

Integrated Analysis of Immune-Related circRNA-miRNA-mRNA …

WebOct 7, 2024 · Background Many studies on long chain non-coding RNAs (lncRNAs) are published in recent years. But the roles of lncRNAs in aortic dissection (AD) are still unclear and should be further examined. The present work focused on determining the molecular mechanisms underlying lncRNAs regulation in aortic dissection on the basis of the … WebApr 12, 2024 · The young shoots of the tea plant Baiye No. 1 display an albino phenotype in the early spring under low environmental temperatures, and the leaves re-green like those of common tea cultivars during the warm season. Periodic albinism is precisely regulated by a complex gene network that leads to metabolic differences and enhances the nutritional … WebNov 24, 2024 · To screen ceRNA networks related to LUAD prognosis, we downloaded expression and survival data related to the 20 target DE mRNAs in the ENST00000609697 ceRNA network from the UCSC Xena database. RASL12 expression was downregulated in LUAD ( P < 0.0001) (Fig. 6 E), and this downregulation was positively correlated with … how many rads are in chernobyl

Integrated analysis of lncRNA-miRNA-mRNA ceRNA network in human …

WebEnter a human gene symbol (e.g. "Hmga2") or an Ensembl gene (ENSG00000149948) or transcript (ENST00000403681) ID AND/OR 3. Do one of the following: ... To reference information from this database, please cite one of the following papers: McGeary SE, Lin KS, Shi CY, Pham T, Bisaria N, Kelley GM, Bartel DP. WebmiRDB is an online database for miRNA target prediction and functional annotations. All the targets in miRDB were predicted by a bioinformatics tool, MirTarget, which was … how deep is a shackleWebJan 21, 2024 · To study this, data were downloaded from the Gene Expression Omnibus database (GSE126170), which contained three human trabecular meshwork cell (HTMC) samples treated with 300 µm hydrogen peroxide and three control samples treated with vehicle. ... Agilent-078298 human ceRNA array V1.0 4X180K (Agilent Technologies, … how many rads is dangerous

"WebOct 11, 2016 · The database provides the function of data search, browse, download, submit and feedback for the user to study particular circular RNA of interest and update the … " - Human cerna database

Human cerna database

WebJan 4, 2024 · Competition for microRNA (miRNA) binding between RNA molecules has emerged as a novel mechanism for the regulation of eukaryotic gene expression. Competing endogenous RNA (ceRNA) can act as decoys for miRNA binding, thereby forming a ceRNA network by regulating the abundance of other RNA transcripts … WebThe Human ncRNA Database. GeneCaRNA is a searchable, integrative database that provides comprehensive, user-friendly information on all non-coding RNA (ncRNA) …

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WebJun 15, 2024 · To further explore immune-related ceRNA regulatory relationships in IS, we obtained immune-related genes (IRGs) in the ImmPort database and intersected the IRGs with mRNAs in the ceRNA network and the hub genes of DEmRNAs (Figure 6A). As a result, the overlapping gene FGF9 was identified as the immune-related hub gene, and … WebceRNABase is designed for decoding Pan-Cancer ceRNA networks involving lncRNAs and mRNAs by analyzing 5599 tumor and normal samples and 108 CLIP-Seq (HITS-CLIP, …

WebApr 28, 2024 · CircAtlas: an integrated resource of one million highly accurate circular RNAs from 1070 vertebrate transcriptomes. Existing circular RNA (circRNA) databases have … WebCerna (surname) Cerna is a surname. Notable people with the surname include: Panait Cerna (1881–1913), Romanian writer. J. D. Cerna, American actor. Ismael Cerna …

WebJan 1, 2024 · In summary, the NcPath database will serve as an important and continually updated platform that provides annotation and visualization of the pathways on which … WebEsophageal squamous cell carcinoma (ESCC) is a lethal gastrointestinal malignancy worldwide. We aimed to identify an angiogenesis-related lncRNAs (ARlncRNAs) signature that could predict the prognosis in ESCC. The GSE53624 and GSE53622 datasets were derived from the GEO database. The differently expressed ARlncRNAs (DEARlncRNAs) …

WebDec 20, 2024 · The mRNAs involved in the ceRNA networks were selected to perform the PPI network analysis based on the STRING database. As Fig. 5 shows, the PPI …

WebNov 26, 2024 · Collectively, LnCeVar will serve as an important resource for investigating the functions and mechanisms of personalized genomic variations that disturb ceRNA … how deep is a shallow sinkWebDec 3, 2024 · CSCD (cancer-specific circRNA database) collects available RNASeq datasets in cancer and normal samples. TSCD (Tissue-Specific CircRNA Database) … how deep is a shallow water wellWebDec 15, 2024 · Background: Growing evidence has recently revealed the characteristics of long noncoding (lncRNA)/circular RNA (circRNA)-microRNA (miRNA)-mRNA networks in numerous human diseases. However, a scientific lncRNA/circRNA-miRNA-mRNA network related to Graves’ ophthalmopathy (GO) remains lacking.Materials and methods: The … how many rads are fatalWebMar 16, 2024 · The application of databases for use in bioinformatics methods is important in identifying novel circRNA-disease associations.The systematic collection and management of circRNA-disease association data are critical for exploration of the clinical importance of circRNAs.The tissue-specific circRNA database (TSCD) contains information relating ... how many rads for launch siteWebJun 6, 2024 · Here, we redesigned a novel pathway database named NcPath by integrating and visualizing a total of 178,308 human experimentally-validated miRNA-target interactions (MTIs), 36,537 experimentally ... how many rads for airfieldWebSep 24, 2024 · We designed a custom microarray containing 93221 lncRNAs and 27482 mRNAs using eArray, a web-based application for Agilent’s custom microarray design, namely, SBC human ceRNA array. To identify eRNAs and SE-lncRNAs contained in our custom-designed noncoding RNA microarray, we downloaded enhancers from … how many radius equals one diameterWebApr 15, 2024 · The biological functions and pathways of CENPO were analyzed by the gene set variation analysis (GSVA) for gene ontology (GO) terms and the gene set enrichment … how many rads in a circle